Microbiological Quality and Safety of Brazilian Mozzarella Cheese During Production Stages.

This study assessed the microbiological quality and safety of mozzarella during various production stages in northern Tocantins, Brazil, by identifying critical biological points in the industrial environment within a tropical climatic region. Batches of mozzarella were evaluated, from raw milk to primary packaging, with a shelf life of 120 d at 4°C. Indicator microorganisms were quantified, and through microbiological and biomolecular approaches, Salmonella spp. and Listeria monocytogenes were identified. In addition, the toxigenic potential of coagulase-positive staphylococci (CPS) was characterized. Results indicated that the raw milk used for mozzarella production had low microbiological quality; pasteurization of raw milk effectively eliminated all identified pathogens and reduced microbiological counts (p > 0.05). An increase in bacterial counts (>2 log colony-forming unit [CFU]/g) and recontamination with Salmonella spp. and CPS, which potentially produce staphylococcal enterotoxin B, were observed during milk coagulation and curd draining. Stretching of the fermented curd reduced the enterobacteria, total coliforms, and Escherichia coli median values by 2.56, 2.64, and 2.3 log CFU/mL, respectively. Similarly, brining the pieces by immersion reduced the quantity of enterobacteria and total coliforms by 2.3 and 1.6 log CFU/mL, respectively. Of interest, in the freshly finished product, Salmonella spp. was present but L. monocytogenes was absent; however, after the shelf-life period, L. monocytogenes was present but Salmonella spp. was absent. Considering the environmental conditions that can promote the multiplication and preservation of pathogens and spoilage of dairy products in tropical climates, it is necessary to review operational hygiene procedures, particularly in milk coagulation vats and fermentation tables. This will ensure the production of high-quality mozzarella cheese with a reduced consumption risk.

Genomic Epidemiology of SARS-CoV-2 in Tocantins State and the Diffusion of P.1.7 and AY.99.2 Lineages in Brazil.

Tocantins is a state in the cross-section between the Central-West, North and Northeast regions of Brazilian territory; it is a gathering point for travelers and transportation from the whole country. In this study, 9493 genome sequences, including 241 local SARS-CoV-2 samples (collected from 21 December 2020, to 16 December 2021, and sequenced in the MinION platform) were analyzed with the following aims: (i) identify the relative prevalence of SARS-CoV-2 lineages in the state of Tocantins; (ii) analyze them phylogenetically against global SARS-CoV-2 sequences; and (iii) hypothesize the viral dispersal routes of the two most abundant lineages found in our study using phylogenetic and phylogeographic approaches. The performed analysis demonstrated that the majority of the strains sequenced during the period belong to the Gamma P.1.7 (32.4%) lineage, followed by Delta AY.99.2 (27.8%), with the first detection of VOC Omicron. As expected, there was mainly a dispersion of P.1.7 from the state of São Paulo to Tocantins, with evidence of secondary spreads from Tocantins to Goiás, Mato Grosso, Amapá, and Pará. Rio de Janeiro was found to be the source of AY.99.2 and from then, multiple cluster transmission was observed across Brazilian states, especially São Paulo, Paraiba, Federal District, and Tocantins. These data show the importance of trade routes as pathways for the transportation of the virus from Southeast to Northern Brazil.

Validation of conventional PCR-like alternative to SARS-CoV-2 detection with target nucleocapsid protein gene in naso-oropharyngeal samples.

SARS-CoV-2 has spread worldwide and has become a global health problem. As a result, the demand for inputs for diagnostic tests rose dramatically, as did the cost. Countries with inadequate infrastructure experience difficulties in expanding their qPCR testing capacity. Therefore, the development of sensitive and specific alternative methods is essential. This study aimed to develop, standardize, optimize, and validate conventional RT-PCR targeting the N gene of SARS-CoV-2 in naso-oropharyngeal swab samples compared to qPCR. Using bioinformatics tools, specific primers were determined, with a product expected to be 519 bp. The reaction conditions were optimized using a commercial positive control, and the detection limit was determined to be 100 fragments. To validate conventional RT-PCR, we determined a representative sampling of 346 samples from patients with suspected infection whose diagnosis was made in parallel with qPCR. A sensitivity of 92.1% and specificity of 100% were verified, with an accuracy of 95.66% and correlation coefficient of 0.913. Under current Brazilian conditions, this method generates approximately 60% savings compared to qPCR costs. Conventional RT-PCR, validated herein, showed sufficient results for the detection of SARS-CoV-2 and can be used as an alternative for epidemiological studies and interspecies correlations.

Efeito da bactofugação nas contagens e diversidade microbiana de psicrotróficos do leite cru / Effect of bactofugation of raw milk on counts and microbial diversity of psychrotrophs

Esse estudo teve por objetivo verificar o efeito da bactofugação do leite na quantidade e diversidade de psicrotróficos. Como o leite cru era pré-aquecido (≈55ºC) para ser bactofugado, foram coletadas amostras de três lotes de leite cru refrigerado, pré-aquecido e bactofugado a 10.000g. O pré-aquecimento foi suficiente para eliminação de 99,99% dos psicrotróficos do leite cru. A bactofugação reduziu 89,66% das contagens de psicrotróficos do leite pré-aquecido. Lysinibacillus fusiformis predominou (45, 7%) no leite cru, pré -aquecido (37,5%) e bactofugado (60%). Bacillus invictae (20%), Enterococcus faecalis (10%) e Kurthia gibsonii (10%) também foram remanescentes à bactofugação, que aparentemente não tem efeito sobre uma população específica de micro-organismos, mas reduz proporcionalmente toda a microbiota psicrotrófica do leite cru.

Resistência antimicrobiana e caracterização molecular do grupo filogenético de STEC e EPEC típicas e atípicas isoladas de queijos Minas Frescal clandestinos / Antimicrobial resistance and molecular characterization of the phylogenetic group of STEC and EPEC typical and atypical isolated from clandestines Minas Frescal cheeses

Esse estudo avaliou a resistência antimicrobiana e o grupo filogenético de Escherichia coli enteropatogênicas (EPEC) e produtoras de toxina shiga-like (STEC) em 10 amostras de queijos Minas Frescal clandestinos. A média da contagem de E. coli foi de 1,1 x 105 UFC/g. Duas (1,8%) das 111 cepas foram identificadas como EPEC (gene eaeA) sendo uma EPEC típica (gene bfpA) e outra atípica. Outras três (2,7%) foram identificadas como STEC (gene stx2). A t-EPEC foi resistente à estreptomicina e a a-EPEC à cefoxitina e ampicilina. Uma STEC foi considerada multirresistente (ampicilina, estreptomicina e tetraciclina), outra resistente à tetraciclina e outra sensível. A presença de t-EPEC, juntamente com o predomínio de cepas do grupo filogenético A (60%), confirmam a possível origem fecal humana dos isolados de E. coli nos queijos clandestinos.

Complete Genome Sequence of Streptococcus agalactiae Strain S25 Isolated from Peritoneal Liquid of Nile Tilapia.

Streptococcus agalactiae (Lancefield group B; GBS) is one of the major pathogens in fish production, especially in Nile tilapia (Oreochromis niloticus). The genomic characteristics of GBS isolated from fish must be more explored. Thus, we present here the genome of GBS S25, isolated from Nile tilapia from Brazil.

Preservatives and neutralizing substances in milk: analytical sensitivity of official specific and nonspecific tests, microbial inhibition effect, and residue persistence in milk / Sustâncias conservantes e neutralizantes no leite: sensibilidade analítica das provas oficiais específicas, provas inespecíficas, inibição microbiana e persistência de resíduos no leite

Milk fraud has been a recurring problem in Brazil; thus, it is important to know the effect of most frequently used preservatives and neutralizing substances as well as the detection capability of official tests. The objective of this study was to evaluate the analytical sensitivity of legislation-described tests and nonspecific microbial inhibition tests, and to investigate the effect of such substances on microbial growth inhibition and the persistence of detectable residues after 24/48h of refrigeration. Batches of raw milk, free from any contaminant, were divided into aliquots and mixed with different concentrations of formaldehyde, hydrogen peroxide, sodium hypochlorite, chlorine, chlorinated alkaline detergent, or sodium hydroxide. The analytical sensitivity of the official tests was 0.005%, 0.003%, and 0.013% for formaldehyde, hydrogen peroxide, and hypochlorite, respectively. Chlorine and chlorinated alkaline detergent were not detected by regulatory tests. In the tests for neutralizing substances, sodium hydroxide could not be detected when acidity was accurately neutralized. The yogurt culture test gave results similar to those obtained by official tests for the detection of specific substances. Concentrations of 0.05% of formaldehyde, 0.003% of hydrogen peroxide and 0.013% of sodium hypochlorite significantly reduced (P<0.05) the microbial counts in milk after 24 and 48h refrigeration. Formaldehyde and sodium hypochlorite remained detectable in milk after 48 and 24h of refrigeration, respectively; while hydrogen peroxide could not be detected after 24h. Official tests for the detection of milk fraud by the addition of preservatives and neutralizing substances present limitations and may be ineffective in detecting milk adulteration

Fraudes no leite têm sido um problema recorrente no Brasil, tornando importante conhecer o efeito dos conservantes e neutralizantes utilizados com maior frequência, e a capacidade de detecção das provas oficiais. O objetivo deste trabalho foi avaliar a sensibilidade analítica de provas descritas pela legislação, das provas por inibição microbiana inespecífica, o efeito dessas substâncias na inibição do crescimento microbiano e a persistência de resíduos detectáveis após 48 horas de refrigeração. Lotes de leite cru, livres de sustâncias adulterantes, foram aliquotados e adicionados de diferentes concentrações de formaldeído, peróxido de hidrogênio, hipoclorito de sódio, cloro, detergente alcalino clorado e hidróxido de sódio. A sensibilidade analítica das provas oficiais foi: 0,005% para formaldeído; 0,003% para peróxido de hidrogênio e 0,013% para hipoclorito. Cloro e detergente alcalino clorado não foram detectados pelas provas oficiais. A prova de neutralizantes não detectou hidróxido de sódio quando a acidez foi neutralizada com precisão. A prova da cultura de iogurte apresentou resultados próximos ao das provas oficiais para substâncias específicas. Concentrações de 0,05% formaldeído, 0,003% de peróxido de hidrogênio e 0,013% de hipoclorito de sódio reduziram significativamente (P<0,05) a microbiota do leite após 24 e 48 horas de refrigeração. O formaldeído e hipoclorito de sódio permaneceram detectável no leite após 48 e 24 horas de refrigeração, respectivamente e o peróxido de hidrogênio não foi detectável após 24 horas. As provas oficiais para a pesquisa de fraudes por adição de conservantes e neutralizantes ao leite apresentam limitações e podem não ser capazes de detectar adulterações no leite